Stool PCR for gut infections (rotavirus, norovirus)
stool PCR · gut infection test · rotavirus test · norovirus test · stomach flu test
This stool test looks for viruses and germs that cause diarrhea and vomiting.
For sudden diarrhea and vomiting, especially in children, and for outbreaks in a family or group.
⏱ Duration: collection takes a few minutes; results usually come in 1 to 2 days

Be sure to tell your doctor
How to prepare
- Container. Get a sterile container from a pharmacy or the lab. For stool, choose one with a small spoon in the lid.
- Antibiotics. It is better to do the test before starting antibiotics. If you already take them, do not stop on your own. Tell your doctor.
- Collection. Collect stool from a clean surface or a diaper, not from the toilet water. Do not mix in urine.
- Delivery. Bring the container to the lab the same day. Ask the lab how to store it until then.
What to bring
- The stool container
- Your referral
- Your ID
How it goes
- Line the potty or toilet with clean plastic wrap or paper
- Use the spoon in the lid to take a bit of stool, ideally with some of the liquid part
- Put it in the container. Fill no more than a third
- Close it tightly and label it
- Wash your hands and take the container to the lab
What you'll feel
- Nothing unpleasant. It is a normal stool sample
- Collecting it does not bother a child. You can take it from a potty or diaper
Afterwards
- Give fluids often, in small sips. This matters most with diarrhea
- Wash your hands after the toilet and after changing diapers
- Your doctor will explain the result
Contact a doctor straight away if
- The child has not peed for a long time, has a dry mouth, or cries without tears: see a doctor urgently
- Blood in the stool or a high fever: see a doctor the same day
- Severe drowsiness, the child will not wake up, or seizures: call emergency services
Common questions
Can I collect stool from a diaper?
Yes, if it has not soaked in. Scoop it from the surface of the diaper with the spoon.
Are antibiotics needed for rotavirus?
Usually not. It is a virus. Drinking fluids is the main thing. Your doctor will prescribe treatment.