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Stool PCR for gut infections (rotavirus, norovirus)

stool PCR · gut infection test · rotavirus test · norovirus test · stomach flu test

This stool test looks for viruses and germs that cause diarrhea and vomiting.

For sudden diarrhea and vomiting, especially in children, and for outbreaks in a family or group.

⏱ Duration: collection takes a few minutes; results usually come in 1 to 2 days

Be sure to tell your doctor

How to prepare

  • Container. Get a sterile container from a pharmacy or the lab. For stool, choose one with a small spoon in the lid.
  • Antibiotics. It is better to do the test before starting antibiotics. If you already take them, do not stop on your own. Tell your doctor.
  • Collection. Collect stool from a clean surface or a diaper, not from the toilet water. Do not mix in urine.
  • Delivery. Bring the container to the lab the same day. Ask the lab how to store it until then.

What to bring

  • The stool container
  • Your referral
  • Your ID

How it goes

  1. Line the potty or toilet with clean plastic wrap or paper
  2. Use the spoon in the lid to take a bit of stool, ideally with some of the liquid part
  3. Put it in the container. Fill no more than a third
  4. Close it tightly and label it
  5. Wash your hands and take the container to the lab

What you'll feel

  • Nothing unpleasant. It is a normal stool sample
  • Collecting it does not bother a child. You can take it from a potty or diaper

Afterwards

  • Give fluids often, in small sips. This matters most with diarrhea
  • Wash your hands after the toilet and after changing diapers
  • Your doctor will explain the result

Contact a doctor straight away if

  • The child has not peed for a long time, has a dry mouth, or cries without tears: see a doctor urgently
  • Blood in the stool or a high fever: see a doctor the same day
  • Severe drowsiness, the child will not wake up, or seizures: call emergency services

Common questions

Can I collect stool from a diaper?

Yes, if it has not soaked in. Scoop it from the surface of the diaper with the spoon.

Are antibiotics needed for rotavirus?

Usually not. It is a virus. Drinking fluids is the main thing. Your doctor will prescribe treatment.